イネジェノタイピングライブラリIntegrated Breeding Platform (IBP):https://www.integratedbreeding.netDevelopment of genome-wide SNP assays for rice. McCouch, S.R., Zhao, K., Wright, M., Tung C.W., Ebana, K., Thomson, M., Reynolds, A., Wang, D., DeClerck, G., Ali, L., McCIung, A., Eizenga, G., Bustamante, C. (2010). Breeding Science 60: 524–535. (

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Development of a SNP genotyping panel for detecting polymorphisms in Oryza glaberrima/O. sativa interspecific crosses. Pariasca-Tanaka, J., Lorieux, M., He, C., McCouch, S., Thomson, M.J., Wissuwa, M. (2014). Euphytica 201(1): 67-78. (

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コムギジェノタイピングライブラリCerealsDB 2.0: an integrated resource for plant breeders and scientists.Wilkinson, P.A., Winfield, M.O., Barker, G.L.A., Allen, A.M., Burridge, A, Coghill, J.A., Burridge, A. and Edwards, K.J. (2012), BMC Bioinformatics 13: 219 (

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Fact sheet: DNA requirements (

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Poster: Key trait screening on global wheat accessions using KASP genotyping markers A new open resource for the wheat breeding community :(

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Case study: University of Bristol – The Cereal Genomics Group (wheat) Development and validation of KASP SNP assays for wheat that can be implemented in marker-assisted selection (MAS) to improve future wheat yields. (

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Application note: University of Bristol – The Cereal Genomics group (wheat) Discovery and development of exome-based, co-dominant single nucleotide polymorphism markers in hexaploid wheat (Triticum aestivum L.) (

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Research article: Plant Biotechnology Journal Transcript-specific, single-nucleotide polymorphism discovery and linkage analysis in hexaploid bread wheat (Triticum aestivum L.) (

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Press release: Wheat genome project gains funding boost from CIRC (

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ダイズジェノタイピングライブラリIntegrated Breeding Platform (IBP):https://www.integratedbreeding.netA High Density Integrated Genetic Linkage Map of Soybean and the Development of a 1536 Universal Soy Linkage Panel for Quantitative Trait Locus Mapping. Hyten, D.L. , Choi, I.-Y., Song, Q., Specht, J.E., Carter, T.E. Jr., Shoemaker, R.C., Hwang, E.-Y., Matukumalli, L.K., Cregan, P.B. (2010). Crop Science 50:960 (

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SNP identification and marker assay development for high-throughput selection of soybean cyst nematode resistance. Shi, Z., Liu, S., Noe, J., Arelli, P., Meksem, K., & Li, Z. (2015). SNP identification and marker assay development for high-throughput selection of soybean cyst nematode resistance. BMC genomics, 16(1), 314. (

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結論: 「3つの機能的なSNPマーカー(Rhg1遺伝子座に2つ、Rhg4遺伝子座に1つ)が同定されました。ダイズシストセンチュウ(SCN, Soybean Cyst Nematode)抵抗性を選択するための遺伝子型情報を提供し、多くの遺伝資源系統についてダイズ品種PekingをPI 88788から識別できます。堅牢なKASP SNPマーカーアッセイが開発されました。 ほとんどの場合、これらのマーカーの1つまたは2つを使用することで、SCN抵抗性を示す植物の高スループットマーカー選抜に十分です。」
トマトジェノタイピングライブラリSingle Nucleotide Polymorphism Discovery in Cultivated Tomato via Sequencing by Synthesis. Hamilton, J. P., Sim, S. C., Stoffel, K., Van Deynze, A., Buell, C. R., Francis, D. M. (2012). The Plant Genome. Vol. 5, 17-29. (

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High-Density SNP Genotyping of Tomato (Solanum lycopersicum L.) Reveals Patterns of Genetic Variation Due to Breeding. Sim, S-C., Van Deynze, A., Stoffel, K., Douches, D.S., Zarka, D., Ganal, M.W. … & Francis, D.M. (2012). PLoS ONE 7(9): e45520. (

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トウモロコシジェノタイピングライブラリInternational Maize and Wheat Improvement Center (CIMMYT):http://www.cimmyt.org/enIntegrated Breeding Platform (IBP):https://www.integratedbreeding.netDevelopment of single nucleotide polymorphism (SNP) markers for use in commercial maize (Zea mays L.) germplasm. Jones, E., Chu, W. C., Ayele, M., Ho, J., Bruggeman, E., Yourstone, K., ... & Smith, S. (2009). Molecular Breeding, 24(2), 165-176. (

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Mining for single nucleotide polymorphisms and insertions/deletions in maize expressed sequence tag data. Batley, J., Barker, G., O’Sullivan, H., Edwards, K. J., & Edwards, D. (2003). Plant Physiology, 132(1), 84-91. (

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Genetic gains in grain yield through genomic selection in eight bi-parental maize populations under drought stress. Beyene, Y., Semagn, K., Mugo, S., Tarekegne, A., Babu, R., Meisel, B., ... & Crossa, J. (2015). Crop Science, 55(1), 154-163. (

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QTL mapping and molecular breeding for developing stress resilient maize for sub-Saharan Africa. Semagn, K., Beyene, Y., Babu, R., Nair, S., Gowda, M., Das, B., ... & Warburton, M. L. (2015). Crop Science, 55(1), 1-11. (

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