Protein-Peptide InteractionsDeciphering the Synthetic and Refolding Strategy of a Cysteine-Rich Domain in the Tumor Necrosis Factor Receptor (TNF-R) for Racemic Crystallography Analysis and d-Peptide Ligand Discovery. ()ACS Bio Med Chem Au, December 11, 2023
Alexander J. Lander, Yifu Kong, Yi Jin, Chuanliu Wu, and Louis Y. P. Luk. DOI: https://doi.org/10.1021/acsbiomedchemau.3c00060.
Linker remodels human Galectin-8 structure and regulates its hemagglutination and pro-apoptotic activity.()International Journal of Biological Macromolecules, Available online 16 June 2023
Yunlong Si, Jun Cai, Jiahui Zhu, Yuchen Wang, Fali Zhang, Li Meng, Jing Huang, Anqi Shi. DOI: https://doi.org/10.1016/j.ijbiomac.2023.125456.
A peptide interfering with the dimerization of oncogenic KITENIN protein and its stability suppresses colorectal tumour progression. ()Clin Transl Med. 2022 Jul;12(7):e871.
Sung Jin Kim, Eun Gene Sun, Jeong A Bae, Sehoon Park, Chang-Soo Hong, Zee-Yong Park, Hangun Kim, Kyung Keun Kim. DOI: 10.1002/ctm2.871
Protein-Protein Interactions Faricimab maintains substance integrity and sterility after compounding and storage in two different polypropylene syringe types. ()Research Square, posted April 29th, 2024
Alexander Taschauer, Arthur Sedivy, Daniel Egger, Reinhard Angermann, Haider Sami, Claudia Wunder, Sebastian Waldstein. DOI: https://doi.org/10.21203/rs.3.rs-4077362/v1.
Structural insights into the ubiquitylation strategy of the oligomeric CRL2FEM1B E3 ubiquitin ligase. ()EMBO J. 2024 Feb 15
Zonglin Dai, Ling Liang, Weize Wang, Peng Zuo, Shang Yu, Yaqi Liu, Xuyang Zhao, Yishuo Lu, Yan Jin, Fangting Zhang, Dian Ding, Weiwei Deng, Yuxin Yin. DOI: 10.1038/s44318-024-00047-y.
Identification of broad-spectrum neutralizing antibodies against influenza A virus and evaluation of their prophylactic efficacy in mice. ()Antiviral Research, Volume 213, May 2023
Sumin Son, Soo Bin Ahn, Geonyeong Kim, Yejin Jang, Chunkyu Ko, Meehyein Kim, Sang Jick Kim. DOI: 10.1016/j.antiviral.2023.105591.
Mechanical forces impair antigen discrimination by reducing differences in T-cell receptor/peptide–MHC off-rates. ()The EMBO Journal, 2022
Johannes Pettmann, Lama Awada, Bartosz Różycki, Anna Huhn, Sara Faour, Mikhail Kutuzov, Laurent Limozin, Thomas R Weikl, P Anton van der Merwe, Philippe Robert, Omer Dushek. DOI: 10.15252/embj.2022111841.
The ABC transporter MsbA adopts the wide inward-open conformation in E. coli cells. ()Sci Adv. 2022 Oct 14;8(41):eabn6845. Epub 2022 Oct 12.
Laura Galazzo, Gianmarco Meier, Dovile Januliene, Kristian Parey, Dario De Vecchis, Bianca Striednig, Hubert Hilbi, Lars V Schäfer, Ilya Kuprov, Arne Moeller, Enrica Bordignon, Markus A Seeger. doi: 10.1126/sciadv.abn6845.
A novel mRNA decay inhibitor abolishes pathophysiological cellular transition. ()Cell Death Discovery volume 8, Article number: 278 (2022)
Daisuke Kami, Toshimasa Ishizaki, Toshihiko Taya, Akira Katoh, Hiroyuki Kouji & Satoshi Gojo. DOI: 10.1038/s41420-022-01076-4
Cryo-EM structures of a LptDE transporter in complex with Pro-macrobodies offer insight into lipopolysaccharide translocation. ()Nature Communications, 2022
Mathieu Botte, Dongchun Ni, Stephan Schenck, Iwan Zimmermann, Mohamed Chami, Nicolas Bocquet, Pascal Egloff, Denis Bucher, Matilde Trabuco, Robert K. Y. Cheng, Janine D. Brunner, Markus A. Seeger, Henning Stahlberg & Michael Hennig. DOI: 10.1038/s41467-022-29459-2
Kinetic analysis of antibody binding to integral membrane proteins stabilized in SMALPs. ()BBA Advances, 2021
P. Sharma, M. Plant, S. K. Lam, Q.Chen. doi: https://doi.org/10.1016/j.bbadva.2021.100022
Oxidation increases the binding of EGCG to serum albumin revealed by kinetic data from label-free optical biosensor with reference channel. ()Analyst, 2019
B. Peter, A. Saftics, B. Kovacs, S. Kurunczi, R. Horvath. DOI : 10.1039/C9AN01779H
Plant Sciences, Protein-Protein InteractionsHSL1 and BAM1/2 impact epidermal cell development by sensing distinct signaling peptides. ()Nature Communications, 2022
Andra-Octavia Roman, Pedro Jimenez-Sandoval, Sebastian Augustin, Caroline Broyart, Ludwig A Hothorn, Julia Santiago. DOI: 10.1038/s41467-022-28558-4
Small Molecules/FBDD Macrophage P2Y6R activation aggravates psoriatic inflammation through IL-27-mediated Th1 responses.()Acta Pharmaceutica Sinica B, Available online 20 June 2024
Li Yin, Enming Zhang, Tianqi Mao, Yifan Zhu, Shurui Ni, Yehong Li, Chunxiao Liu, Yafei Fang, Kexin Ni, Yuhe Lu, Huanqiu Li, Mengze Zhou, Qinghua Hu. DOI: https://doi.org/10.1016/j.apsb.2024.06.008.
Development of an analytical platform for the affinity screening of natural extracts by SEC-MS towards PPARα and PPARγ receptors.()Analytica Chimica Acta, Volume 1309, 22 June 2024, 342666
G. De Soricellis, F. Rinaldi, S. Tengattini, C. Temporini, S. Negri, D. Capelli, R. Montanari, H. Cena, S. Salerno, G. Massolini, F. Guzzo, E. Calleri. DOI: 10.1016/j.aca.2024.342666.
Evolutionary bet-hedging at the nanoscale.()Research Square, 02 Apr 2024
Kryuchkov M, Jobin M, Savitsky V, Smirnov S, Katanaev VL. DOI: 10.1039/D4MD00093E.
Identification of fragments targeting SMYD3 using highly sensitive kinetic and multiplexed biosensor-based screening.()RSC Med. Chem., 2024
Edward A FitzGerald, Daniela Cederfelt, Bjarte A. Lund, Nadine Myers, He Zhang, Doreen Dobritzsch and Helena Danielson. DOI: 10.1039/D4MD00093E.
Structural and biochemical analysis of a B12 super-binder. ()bioRxiv Posted February 18, 2024.
Martinez-Felices, J.M., Whittaker, J.J., Slotboom, D.J., Guskov, A. DOI: https://doi.org/10.1101/2024.02.16.580637.
Efficient large-scale exploration of fragment hit progression by exploiting binding-site purification of actives (B-SPA) through combining multi-step array synthesis and HT crystallography. ()ChemRxiv 09 February 2024
Harold Grosjean, Anthony Aimon, Storm Hassell-Hart, Warren Thompson, Lizbé Koekemoer, James Bennett, Anthony Bradley, Cameron Anderson, Conor Wild, William Bradshaw, Edward A. FitzGerald, Tobias Krojer, Oleg Fedorov, Philip C. Biggin, John Spencer and Frank von Delft.
FDW028, a novel FUT8 inhibitor, impels lysosomal proteolysis of B7-H3 via chaperone-mediated autophagy pathway and exhibits potent efficacy against metastatic colorectal cancer. ()Cell Death & Disease volume 14, Article number: 495 (2023)
Mengmeng Wang, Zhoudong Zhang, Mengxi Chen, Yixin Lv, Sheng Tian, Fanyi Meng, Yawen Zhang, Xuqin Guo, Yinshuang Chen, Man Yang, Jiawei Li, Tian Qiu, Fang Xu, Zhi Li, Qi Zhang, Jie Yang, Jing Sun, Hongjian Zhang, Haiyang Zhang, Huanqiu Li & Weipeng Wang. DOI: 10.1038/s41419-023-06027-0
Targeting Siderophore-Mediated Iron Uptake in M. abscessus: A New Strategy to Limit the Virulence of Non-Tuberculous Mycobacteria. ()Pharmaceutics, 2023
Matteo Morivtina Rovers, Laurent R. Chiarelli, Martina Tomaiuolo, Pietro Del Re, Giuseppe F. Mangiatordi, Anna Griego, Loris Rizzello, Alberto Cassetta, Sonia Covaceuszach, Stefania Villa, and Fiorella Meneghetti. DOI: https://doi.org/10.3390/pharmaceutics15020502
A toolkit for the identification of NEAT1_2/paraspeckle modulators.()Nucleic Acids Research, 2022
Haiyan An, Karen T Elvers, Jason A Gillespie, Kimberley Jones, John R Atack, Olivera Grubisha, Tatyana A Shelkovnikova. DOI: 10.1093/nar/gkac771
Structures of active-state orexin receptor 2 rationalize peptide and small-molecule agonist recognition and receptor activation. ()Nature Communications, 2021
C. Hong, N.J. Byrne, B. Zamlynny, S. Tummala, L. Xiao, J.M. Shipman, A.T. Partridge, C. Minnick, M.J. Breslin, M.T. Rudd, et al. DOI: 10.1038/s41467-021-21087-6
Discovery of fragments inducing conformational effects in dynamic proteins using a second-harmonic generation biosensor. ()RSC Advances, 2021
E.A. FitzGerald, M.T. Butko, P. Boronat, D. Cederfelt, M. Abramsson, H. Ludviksdottir, J.E. van Muijlwijk-Koezen, I.J.P. de Esch, D. Dobritzsch, T. Young, H. Danielson. DOI: 10.1039/D0RA09844B
Grating-coupled interferometry reveals binding kinetics and affinities of Ni ions to genetically engineered protein layers. ()Scientific Reports, 2020
H. Jankovics, B. Kovacs, A. Saftics, T. Gerecsei, E. Tóth, I. Szekacs, F. Vonderviszt, R. Horvath. DOI : 10.1038/s41598-020-79226-w
Dynamics of human protein kinase Aurora A linked to drug selectivity. ()E-Life, 2018
W. Pitsawong, V. Buosi, R. Otten, R.V. Agafonov, A. Zorba, N. Kern, S. Kutter, G. Kern, R.A.P. Pádua, X. Meniche, D. Kern. DOI: 10.7554/eLife.36656
Plant Sciences, PeptidesBAM1/2 receptor kinase signaling drives CLE peptide-mediated formative cell divisions in Arabidopsis roots. ()PNAS, 2020
A. D. Crook, A. C. Willoughby, O. Hazak, S. Okuda, K. R. VanDerMolen, C. L. Soyars, P. Cattaneo, N. M. Clark, R. Sozzani, M. Hothorn, C. S. Hardtke, Z. L. Nimchuk. “” DOI : 10.1073/pnas.2018565117
Plant photoreceptors and their signaling components compete for binding to the ubiquitin ligase COP1 using their VP-peptide motifs. ()The EMBO Journal, 2019
K. Lau, R. Podolec, R. Chappuis, R. Ulm, M. Hothorn. DOI: 10.15252/embj.2019102140
COVID-19 ResearchHighly potent bispecific sybodies neutralize SARS-CoV-2. ()bioRxiv, 2020
J. D. Walter, C. A. J. Hutter, A. A. Garaeva, M. Scherer, I. Zimmermann, M. Wyss, J. Rheinberger, Y. Ruedin, J. C. Earp, P. Egloff, M. Sorgenfrei, L. Hürlimann, I. Gonda, G. Meier, S. Remm, S. Thavarasah, G. Zimmer, D. J. Slotboom, C. Paulino, P. Plattet, M. A. Seeger. DOI : 10.1101/2020.11.10.376822
Biologics Development, COVID-19 ResearchBiparatopic sybodies neutralize SARS-CoV-2 variants of concern and mitigate drug resistance. ()EMBO reports, 2022
J. D. Walter et al., DOI:https://doi.org/10.15252/embr.202154199
Sybodies targeting the SARS-CoV-2 receptor-binding domain. ()bioRxiv, 2020
J. D. Walter, C. A. J. Hutter, I. Zimmermann, M. Wyss, P. Egloff, M. Sorgenfrei, L. M. Hürlimann, I. Gonda, G. Meier, S. Remm, S. Thavarasah, P. Plattet, M. A. Seeger. DOI : 10.1101/2020.04.16.045419
Biologics DevelopmentInhibition of the MET Kinase Activity and Cell Growth in MET-Addicted Cancer Cells by Bi-Paratopic Linking. ()Journal of Molecular Biology, 2019
F. Andres, L. Iamele, T. Meyer, J.C. Stüber, F. Kast, E. Gherardi, H.H. Niemann, A. Plückthun. DOI: 10.1016/j.jmb.2019.03.024
Plant SciencesThe SERK3 elongated allele defines a role for BIR ectodomains in brassinosteroid signalling. ()Nature Plants, 2018
U. Hohmann, J. Nicolet, A. Moretti, L.A. Hothorn, M. Hothorn, DOI: 10.1038/s41477-018-0150-9
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